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Formats

Supported Formats

The checked-in source of truth for format routing is config/preview-formats.json in the Burrete repository.

Format families

PathFormatsNotes
Mol* interactive 3DPDB, ENT, PDBQT, PQR, XPDB, CIF, MMCIF, MCIF, BCIF, MMTF, SDF, SD, MOL, MOL2, XYZ, GRO, MVSJ, MVSXMain interactive path for directly supported structures and MolViewSpec scenes. SDF can also use a collection grid; several text structures can switch or fall back to xyzrender.
RDKit molecule gridsSDF, SD, SMILES, SMI, CSV, TSVCollection view with search, sorting, SMARTS filtering and highlighting, selection, append and merge, and export.
Coordinate conversion and xyzrenderABI, COM, CUB, CUBE, FDF, FHIAIMS, GMS, IN, INP, LOG, NW, OUT, PSI4, QCIN, VASP, XYZRBurrete tries its coordinate conversion path for an interactive preview and can use the optional local xyzrender executable as a fallback or artwork renderer.
Molecular dynamics and topologyXTC, TRR, DCD, NCTRAJ, TNG, H5MD, GSD, TRZ, LAMMPSTRJ, MDCRD, NC/NetCDF, TOP, PSF, PRMTOP, TPR, and related registered extensionsTrajectories often require compatible coordinate/topology partners. Registration does not imply that every artifact is meaningful as a standalone structure.
Schrodinger structuresMAE, MAE.GZ, MAEGZ, CMSUses the Maestro conversion path for Mol* where possible, with explicit staged entries and an external-renderer fallback.
OpenMM coordinate artifactsXML, INPCRD, RST7, RESTRT, CRD, RST, STATERender as structures when standalone coordinates can be extracted; otherwise remain inspectable workflow artifacts.
Workflow text and metadataPAR, PRM, RTF, STR, KEY, CHK, CHECKPOINT, DMS, XVG, EDR, FASTA, FDEF, MSJOpen as text or metadata rather than pretending every workflow file is a coordinate structure.
FEP network workspaceGraphML, EDGEOpens a ligand network preview workspace rather than a standard molecule preview.
PharmacophorePH4Converts the pharmacophore model into a previewable Mol* representation.
SpectraMS, MAGMA, MGF, MSP, MZML, MZXMLOpens the dedicated spectrum surface.

Size limits

Quick Look has per-format size limits in the format registry. The desktop workspace can expose richer surfaces for larger or more complex files, but very large files may still require format-specific handling. Binary trajectories and paired topology/coordinate inputs need surface-specific testing; a registered document type alone is not proof of successful decoding on every platform.

Updating support

Format support is a contract surface. Changes must keep the registry, app metadata, Quick Look plists, and focused format tests in sync.